3PIF PDB NFT | MOLNFT bioinformatics, blockchain

Crystal structure of the 5'->3' exoribonuclease Xrn1, E178Q mutant in Complex with Manganese

MOLNFT AF v1 smart contract in GenesisL1 blockchain:

0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba

IPFS of NFT metadata:

bafybeidyvyrjof4ntj5gjr5l3zt6pvzn3xgafs2bwkyfslsgn53lcrfmlm/metadata.json

IPFS of structure file:

bafybeihsqhx6swo2bxfns7j7mmwuaaq4nm7uuynykbio7ftp7k6iddfnaa/3pif.pdb

MOLNFT PDB v1

NFT id:
75174
PDB ID:
3PIF
Name:
Crystal structure of the 5'->3' exoribonuclease Xrn1, E178Q mutant in Complex with Manganese
Keywords:
HYDROLASE
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.92

NFT data

MolNFT PDB v1 is The Protein Data Bank database (URL: https://rcsb.org) of protein structures minted as ERC-721 NFT tokens on GenesisL1 blockchain for public free use, research and entertainment:

H.M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T.N. Bhat, H. Weissig, I.N. Shindyalov, P.E. Bourne.
(2000) The Protein Data Bank Nucleic Acids Research, 28: 235-242.

MOLNFT 3PIF research and analysis (ICN3D with VR)

FASTA sequences

>3pif_A mol:protein length:1155 5'->3' EXORIBONUCLEASE (xrn1)
MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPFDSNAITPGTEFMAKLTENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKKDIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQDADFEIFPLEDKELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDSINXXXXXXXXXXXXXXXXXXXIYSERFVEWKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQVDTVYKTPLAGLFNDIEHNHCIEREFIPESMENVKFLFGLPKGAKLGASSLAGFPSLKTLPLTAELAYNSSVVFNFPSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYSRWPFLRESKLLSLITEETVYEGVKSGKLTKVIERKPQDFERKEFRELKMTLKSNYQRTKAILLDDISALAKVVPVNGLVRNSDGSYSKSFNETIEYYPLQLIVEDVKNKDERYIEKEPLPINKEFPKGSKVVFLGDYAYGGEATVDGYNSETRLKLTVKKGSLRAEPNIGKVRAKLDSQALRFYPTQVXXXXXXXXXXXXXXXXXXXSSAEADSILKTVADWLSEARKPFVVVSLESDSLTKASMAAVESEIIKYVSLPDSSEQKKLAKVPREAILNAESSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNEIIAGNNFGGRLQTRRGLGLDSSFLLNLSDRQLVYHSKASLEHHHHHH
>3pif_B mol:protein length:1155 5'->3' EXORIBONUCLEASE (xrn1)
MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPFDSNAITPGTEFMAKLTENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKKDIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQDADFEIFPLEDKELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDSINXXXXXXXXXXXXXXXXXXXIYSERFVEWKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQVDTVYKTPLAGLFNDIEHNHCIEREFIPESMENVKFLFGLPKGAKLGASSLAGFPSLKTLPLTAELAYNSSVVFNFPSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYSRWPFLRESKLLSLITEETVYEGVKSGKLTKVIERKPQDFERKEFRELKMTLKSNYQRTKAILLDDISALAKVVPVNGLVRNSDGSYSKSFNETIEYYPLQLIVEDVKNKDERYIEKEPLPINKEFPKGSKVVFLGDYAYGGEATVDGYNSETRLKLTVKKGSLRAEPNIGKVRAKLDSQALRFYPTQVXXXXXXXXXXXXXXXXXXXSSAEADSILKTVADWLSEARKPFVVVSLESDSLTKASMAAVESEIIKYVSLPDSSEQKKLAKVPREAILNAESSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNEIIAGNNFGGRLQTRRGLGLDSSFLLNLSDRQLVYHSKASLEHHHHHH
>3pif_C mol:protein length:1155 5'->3' EXORIBONUCLEASE (xrn1)
MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPFDSNAITPGTEFMAKLTENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKKDIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQDADFEIFPLEDKELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDSINXXXXXXXXXXXXXXXXXXXIYSERFVEWKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQVDTVYKTPLAGLFNDIEHNHCIEREFIPESMENVKFLFGLPKGAKLGASSLAGFPSLKTLPLTAELAYNSSVVFNFPSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYSRWPFLRESKLLSLITEETVYEGVKSGKLTKVIERKPQDFERKEFRELKMTLKSNYQRTKAILLDDISALAKVVPVNGLVRNSDGSYSKSFNETIEYYPLQLIVEDVKNKDERYIEKEPLPINKEFPKGSKVVFLGDYAYGGEATVDGYNSETRLKLTVKKGSLRAEPNIGKVRAKLDSQALRFYPTQVXXXXXXXXXXXXXXXXXXXSSAEADSILKTVADWLSEARKPFVVVSLESDSLTKASMAAVESEIIKYVSLPDSSEQKKLAKVPREAILNAESSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNEIIAGNNFGGRLQTRRGLGLDSSFLLNLSDRQLVYHSKASLEHHHHHH
>3pif_D mol:protein length:1155 5'->3' EXORIBONUCLEASE (xrn1)
MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPFDSNAITPGTEFMAKLTENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKKDIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQDADFEIFPLEDKELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDSINXXXXXXXXXXXXXXXXXXXIYSERFVEWKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQVDTVYKTPLAGLFNDIEHNHCIEREFIPESMENVKFLFGLPKGAKLGASSLAGFPSLKTLPLTAELAYNSSVVFNFPSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYSRWPFLRESKLLSLITEETVYEGVKSGKLTKVIERKPQDFERKEFRELKMTLKSNYQRTKAILLDDISALAKVVPVNGLVRNSDGSYSKSFNETIEYYPLQLIVEDVKNKDERYIEKEPLPINKEFPKGSKVVFLGDYAYGGEATVDGYNSETRLKLTVKKGSLRAEPNIGKVRAKLDSQALRFYPTQVXXXXXXXXXXXXXXXXXXXSSAEADSILKTVADWLSEARKPFVVVSLESDSLTKASMAAVESEIIKYVSLPDSSEQKKLAKVPREAILNAESSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNEIIAGNNFGGRLQTRRGLGLDSSFLLNLSDRQLVYHSKASLEHHHHHH

References and links

Current molecular structure file and data about current molecular structure file and NFT token based on it with
PDBID: 3PIF
TITLE: Crystal structure of the 5'->3' exoribonuclease Xrn1, E178Q mutant in Complex with Manganese
DOI: 10.1038/nsmb.1984
AUTHORS: Chang, J.H., Xiang, S., Tong, L.
ACCESSION DATE: 11/06/10
Obtained at RCSB PDB https://rcsb.org
RCSB Link: https://www.rcsb.org/structure/3PIF