3J45 PDB NFT | MOLNFT bioinformatics, blockchain

Structure of a non-translocating SecY protein channel with the 70S ribosome

MOLNFT AF v1 smart contract in GenesisL1 blockchain:

0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba

IPFS of NFT metadata:

bafybeibtcvbm22qsmbarsh25yae425yhq7v6na63zttb452jgq23okwidi/metadata.json

IPFS of structure file:

bafybeibd2ezocgapwkxdxwhjczpxquvxn357nfrnadzhjzwi2vlfgvs5um/3j45.pdb

MOLNFT PDB v1

NFT id:
68042
PDB ID:
3J45
Name:
Structure of a non-translocating SecY protein channel with the 70S ribosome
Keywords:
RIBOSOME/PROTEIN TRANSPORT
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
9.50

NFT data

MolNFT PDB v1 is The Protein Data Bank database (URL: https://rcsb.org) of protein structures minted as ERC-721 NFT tokens on GenesisL1 blockchain for public free use, research and entertainment:

H.M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T.N. Bhat, H. Weissig, I.N. Shindyalov, P.E. Bourne.
(2000) The Protein Data Bank Nucleic Acids Research, 28: 235-242.

MOLNFT 3J45 research and analysis (ICN3D with VR)

FASTA sequences

>3j45_y mol:protein length:437 Protein translocase subunit SecY
XGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGX
>3j45_4 mol:na length:61 23S ribosomal RNA
CGGUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGU
>3j45_5 mol:na length:108 23S ribosomal RNA
UGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAA
>3j45_E mol:protein length:56 Preprotein translocase subunit SecE
XEARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRFX
>3j45_G mol:protein length:65 Protein-export membrane protein SecG
FLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNI
>3j45_T mol:protein length:100 50S ribosomal protein L23
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE
>3j45_U mol:protein length:103 50S ribosomal protein L24
AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSETIK
>3j45_Y mol:protein length:63 50S ribosomal protein L29
MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA
>3j45_1 mol:na length:63 23S ribosomal RNA
AAGGACGUGCUAAUCUGCGAUAAGCGUCGGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUU
>3j45_2 mol:na length:36 23S ribosomal RNA
AAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGA
>3j45_3 mol:na length:18 23S ribosomal RNA
CGAGGCACUACGGUGCUG

References and links

Current molecular structure file and data about current molecular structure file and NFT token based on it with
PDBID: 3J45
TITLE: Structure of a non-translocating SecY protein channel with the 70S ribosome
DOI: 10.1038/nature12720
AUTHORS: Menetret, J.F., Park, E., Gumbart, J.C., Ludtke, S.J., Li, W., Whynot, A., Rapoport, T.A., Akey, C.W.
ACCESSION DATE: 06/18/13
Obtained at RCSB PDB https://rcsb.org
RCSB Link: https://www.rcsb.org/structure/3J45