2RDJ PDB NFT

Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex forms

MOLNFT AF v1 smart contract in GenesisL1 blockchain:

0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba

IPFS of NFT metadata:

bafybeiaj5olhntgmndvgxqfjocllh3aukh2nwregyhyxux4j7fxtlmtrqe/metadata.json

IPFS of structure file:

bafybeicpjs3dpcfxkkbl3c3gtmbiv7bd57kvstzk3xfbxyhxpcv3w2jgge/2rdj.pdb

MOLNFT PDB v1

NFT id:
50277
PDB ID:
2RDJ
Name:
Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex forms
Keywords:
TRANSFERASE/DNA
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.20

NFT data

MolNFT PDB v1 is The Protein Data Bank database (URL: https://rcsb.org) of protein structures minted as ERC-721 NFT tokens on GenesisL1 blockchain for public free use, research and entertainment:

H.M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T.N. Bhat, H. Weissig, I.N. Shindyalov, P.E. Bourne.
(2000) The Protein Data Bank Nucleic Acids Research, 28: 235-242.

MOLNFT 2RDJ research and analysis (ICN3D with VR)

FASTA sequences

>2rdj_C mol:na length:14 DNA (5'-D(*DGP*DGP*DGP*DAP*DCP*DCP*DCP*DTP*DTP*DCP*DGP*DAP*DAP*DT)-3')
GGGACCCTTCGAAT
>2rdj_E mol:na length:14 DNA (5'-D(*DGP*DGP*DGP*DAP*DCP*DCP*DCP*DTP*DTP*DCP*DGP*DAP*DAP*DT)-3')
GGGACCCTTCGAAT
>2rdj_D mol:na length:16 DNA (5'-D(P*DTP*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3')
TTATTCGAAGGGTCCC
>2rdj_F mol:na length:15 DNA (5'-D(P*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3')
TATTCGAAGGGTCCC
>2rdj_A mol:protein length:352 DNA polymerase IV
MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT
>2rdj_B mol:protein length:352 DNA polymerase IV
MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT

References and links

Current molecular structure file and data about current molecular structure file and NFT token based on it with
PDBID: 2RDJ
TITLE: Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex forms
DOI: 10.1016/j.jmb.2008.03.038
AUTHORS: Wong, J.H.Y., Ling, H.
ACCESSION DATE: 09/24/07
Obtained at RCSB PDB https://rcsb.org
RCSB Link: https://www.rcsb.org/structure/2RDJ